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Ethanol

Ethanol is a colorless, volatile, flammable liquid with a characteristic odor.
It is the principal type of alcohol found in alcoholic beverages and is also used as a fuel, solvent, and disinfectant.
Ethanol is produced by the fermentation of sugars and has numerous industrial and medicinal applications.
Researchers can now optimize their ethanol research with PubCompare.ai's AI-driven platform, which allows them to compare protocols across literature, boost reproducibility and acuracy, and explore relevant kits.
This platform offers a streamlined, data-driven approach to ethanol research, helping scientists enhance the efficiency and quality of their studies.

Most cited protocols related to «Ethanol»

The streptavidin alkaline phosphatase method was adapted to detect the viral antigen using a polyclonal anti-ZIKV antibody produced at the Evandro Chagas Institute2 (link). The biotin-streptavidin peroxidase method was used for immunostaining of tissues with antibodies specific for each marker studied. First, the tissue samples were deparaffinized in xylene and hydrated in a decreasing ethanol series (90%, 80%, and 70%). Endogenous peroxidase was blocked by incubating the sections in 3% hydrogen peroxide for 45 min. Antigen retrieval was performed by incubation in citrate buffer, pH 6.0, or EDTA, pH 9.0, for 20 min at 90 °C. Nonspecific proteins were blocked by incubating the sections in 10% skim milk for 30 min. The histological sections were then incubated overnight with the primary antibodies diluted in 1% bovine serum albumin (Supplementary Table S1). After this period, the slides were immersed in 1 × PBS and incubated with the secondary biotinylated antibody (LSAB, DakoCytomation) in an oven for 30 min at 37 °C. The slides were again immersed in 1X PBS and incubated with streptavidin peroxidase (LSAB, DakoCytomation) for 30 min at 37 °C. The reactions were developed with 0.03% diaminobenzidine and 3% hydrogen peroxide as the chromogen solution. After this step, the slides were washed in distilled water and counterstained with Harris hematoxylin for 1 min. Finally, the sections were dehydrated in an increasing ethanol series and cleared in xylene.
Publication 2018
Alkaline Phosphatase Antibodies Antibodies, Anti-Idiotypic Antigens Antigens, Viral azo rubin S Biotin Buffers Citrates Edetic Acid Ethanol Hematoxylin Immunoglobulins Milk, Cow's Peroxidase Peroxide, Hydrogen Peroxides Proteins Serum Albumin, Bovine Streptavidin Tissues Tritium Xylene Zika Virus
Freshly isolated and cultivated skin samples were harvested at indicated time-points, embedded in optimum cutting tissue compound (Tissue-plus; Scigen Scientific, Gardena, CA, USA), snap frozen in liquid nitrogen and stored at −80 °C until further processing. Frozen tissues were sectioned (5 µm) (Cryotome–Leica Biosystems CM1850, Germany), fixed in ice-cold acetone (10 minutes) and washed with PBS. Fixed sections were stained with unconjugated and conjugated antibodies (Abs) (overnight, 4 °C) and Ab binding was detected using corresponding secondary Abs. Paraffin embedded tissues were deparaffinised by dipping them into Xylol (2x, 5 minutes), 100% ethanol (5 minutes), 70% ethanol (5 minutes) and washed in tap water (2x, 5 minutes). Then they were incubated in antigen retrieval buffer (Dako S1699, Denmark), washed in PBS and stained. Abs used are listed in Table S1.
Publication 2020
Acetone Antibodies Antigens Buffers Cold Temperature Ethanol Freezing Nitrogen Paraffin Skin Tissues Xylene
Tamoxifen was prepared by first dissolving in ethanol (20 mg/500 μl) and mixing this solution with 980 μl corn oil for a final concentration of 20 mg/ml. Ethanol was then removed with a heated speed vacuum. Mice containing CreERT2 that were ~2 months old were injected with approximately 200 μl tamoxifen solution (200 mg/kg) once a day over 5 days. Animals were monitored for adverse effects, and if these became apparent, treatment was stopped. One week after treatment ended, animals were processed as described below for ISH or localization of XFP.
Publication 2009
Aftercare Animals Corn oil Ethanol Mice, House Tamoxifen Vacuum
Tamoxifen was prepared by first dissolving in ethanol (20 mg/500 μl) and mixing this solution with 980 μl corn oil for a final concentration of 20 mg/ml. Ethanol was then removed with a heated speed vacuum. Mice containing CreERT2 that were ~2 months old were injected with approximately 200 μl tamoxifen solution (200 mg/kg) once a day over 5 days. Animals were monitored for adverse effects, and if these became apparent, treatment was stopped. One week after treatment ended, animals were processed as described below for ISH or localization of XFP.
Publication 2009
Aftercare Animals Corn oil Ethanol Mice, House Tamoxifen Vacuum
Standard IHC protocol was followed to stain the tumor tissue samples using the mouse monoclonal antibody against hNIS (human Sodium Iodide Symporter) (Abcam, ab17795), ER (Estrogen Receptor) (Abcam, ab16660, ab288). Briefly, 5 µm sized paraffin embedded tissue sections were de-paraffinized with xylene and endogenous peroxidase activity was quenched with 3% H2O2 in methanol for 30 minutes in the dark. Tissue sections were dehydrated through graded alcohols and subjected to antigen retrieval using 10mM sodium citrate. Sections were washed with TBST (Tris Borate Saline Tween-20) and then blocked with 5% BSA (Bovine Serum Albumin) for one hour. Slides were incubated with the respective mouse monoclonal primary antibody diluted with TBS. Slides were then washed for 5 minutes in TBST and incubated for 1 hour with the respective HRP (Horse Raddish Peroxidase) conjugated anti-mouse secondary antibody diluted with TBS in a ratio of 1∶200. After washing, slides were incubated with DAB (3,3′-diaminobenzidine tetrahydrochloride) (Sigma) and immediately washed under tap water after color development. Slides were then counter stained with hematoxylin. Slides were mounted with DPX (dibutyl phthalate xylene) and were then observed under a light microscope (Carl Zeiss).
Publication 2014
Antibodies, Anti-Idiotypic Antigens Borates Equus caballus estrogen receptor alpha, human Ethanol Homo sapiens Light Microscopy Methanol Monoclonal Antibodies Mus Neoplasms Paraffin Peroxidase Peroxide, Hydrogen Phthalate, Dibutyl Saline Solution Serum Albumin, Bovine SLC5A5 protein, human Sodium Citrate Stains Tissues Tromethamine Tween 20 Xylene

Most recents protocols related to «Ethanol»

Example 14

Compound I calcium salt EtOH solvate Form C was obtained via slurry of Compound I calcium salt amorphous form in EtOH/H2O (9:1, v:v) at room temperature.

A. X-Ray Powder Diffraction

XRPD on Compound I calcium salt EtOH solvate Form C was performed with a Panalytical X'Pert3 Powder XRPD on a Si zero-background holder. The 2 theta position was calibrated against a Panalytical Si reference standard disc. The XRPD diffractogram for Compound I calcium salt EtOH solvate Form C is shown in FIG. 20 and summarized in Table 25.

TABLE 25
XRPD signals for Compound I calcium
salt EtOH solvate Form C
XRPD Angle (degrees Intensity
Peaks2-Theta ± 0.2)%
14.2100.0
25.043.2
35.713.5

Patent 2024
Calcium, Dietary Ethanol Powder Roentgen Rays Salts

Example 11

Compound I calcium salt hydrate Form G was obtained via fast cooling of Compound I calcium salt hydrate Form A solution in EtOH:H2O (v:v, 90:10).

A. X-Ray Powder Diffraction:

XRPD was performed with a Panalytical X'Pert3 Powder XRPD on a Si zero-background holder. The 2 theta position was calibrated against a Panalytical Si reference standard disc. The XRPD diffractogram for Compound I calcium salt hydrate Form G is shown in FIG. 17 and summarized in Table 22.

TABLE 22
XRPD signals for crystalline Compound I
calcium salt hydrate Form G
XRPD Angle (degrees Intensity
Peaks2-Theta ± 0.2)%
15.9100.0
214.867.3
314.763.9
46.058.4
58.817.4
611.814.6
711.98.8
826.66.5

Patent 2024
14-3-3 Proteins Calcium, Dietary Ethanol Powder Salts X-Ray Diffraction

Example 13

Compound I calcium salt EtOH solvate Form B was obtained via temperature cycling between 60° C. and 5° C. with cooling rate of 0.2° C./min of Compound I calcium salt hydrate Form A in EtOH: n-heptane (1:1, v:v).

A. X-Ray Powder Diffraction

Compound I calcium salt EtOH solvate Form B XRPD was performed with a Panalytical X'Pert3 Powder XRPD on a Si zero-background holder. The 2 theta position was calibrated against a Panalytical Si reference standard disc. The XRPD diffractogram for Compound I calcium salt EtOH solvate Form A is shown in FIG. 19 and summarized in Table 24.

TABLE 24
XRPD signals for Compound I calcium salt
EtOH solvate Form B
XRPD Angle (degrees Intensity
Peaks2-Theta ± 0.2)%
14.5100.0
25.032.1
315.412.0
420.311.2

Patent 2024
Calcium, Dietary Ethanol Fever n-heptane Powder Roentgen Rays SALL2 protein, human Salts X-Ray Diffraction
Not available on PMC !

Example 37

To improve inhibition potency relative to FAAH, various portions of the t-TUCB molecule were modified to identify potential FAAH pharmacophores. The 4-trifluoromethoxy group on t-TUCB was modified to the unsubstituted ring (A-3), 4-fluorophenyl (A-2) or 4-chlorophenyl (A-26). Potency on both sEH and FAAH increased as the size and hydrophobicity of the para position substituent increased, with 4-trifluoromethoxy being the most potent on both enzymes. Substituting the aromatic ring for a cyclohexane (A-3) or adamantane (A-4) resulted in a complete loss in activity against FAAH. Results are summarized in Table 1 below.

TABLE 1
Modification of the 4-trifluoromethoxy group of t-TUCB
[Figure (not displayed)]
Stereo-IC50 (nM)
R2—N(R3)—L1chemistryhsEHhFAAH
t-TUCB[Figure (not displayed)]
[Figure (not displayed)]
trans0.8140
A1-[Figure (not displayed)]
[Figure (not displayed)]
trans309,200
A-2[Figure (not displayed)]
[Figure (not displayed)]
trans184,600
A-26[Figure (not displayed)]
[Figure (not displayed)]
trans7380
A-3[Figure (not displayed)]
[Figure (not displayed)]
trans6>1,000
A-4[Figure (not displayed)]
[Figure (not displayed)]
trans3>10,000
A-10[Figure (not displayed)]
[Figure (not displayed)]
81,800

Next, the center portion of the molecule was modified to further investigate the specificity of t-TUCB on FAAH. Switching the cyclohexane linker to a cis conformation (A-5) resulted in a 20-fold loss of potency while removing the ring and replacing it with a butane chain (A-6) resulted in a completely inactive compound. While this suggests the compound must fit a relatively specific conformation in the active site to be active, we found the aromatic linker had essentially the same potency on FAAH (A-7). Although many potent urea-based FAAH inhibitors have a piperidine as the carbamoylating nitrogen, the modification to piperidine here reduced potency 13-fold. Results are summarized in Table 2 below.

TABLE 2
Modification of the central portion of t-TUCB
[Figure (not displayed)]
Stereo-IC50 (nM)
R2—N(R3)—L1chemistryhsEHhFAAH
t-TUCB[Figure (not displayed)]
[Figure (not displayed)]
trans0.8140
A-5[Figure (not displayed)]
[Figure (not displayed)]
cis22,800
A-6[Figure (not displayed)]
[Figure (not displayed)]
15>10,000
A-7[Figure (not displayed)]
[Figure (not displayed)]
7170

Since none of the modifications at this point improved potency towards FAAH, we focused on the benzoic acid portion of the molecule as shown in Table 3. To determine the importance of the terminal acid, the corresponding aldehyde (A-20) and alcohol (A-24) in addition to the amide (A-19) and nitrile (A-11) were tested. While the amide had slightly improved potency, the more reduced forms of the acid (A-20 and A-24) and amide (A-11) had substantially less activity on FAAH. Converting the benzoic acid to a phenol (A-21) increased potency while the anisole (A-22) was completely inactive. Since the amide and acid appeared to be active, the amide bioisostere oxadiazole (A-25) was tested and had 38-fold less potency than the initial compound.

TABLE 3
Modification of the benzoic acid portion of t-TUCB
[Figure (not displayed)]
IC50 (nM)
R1hsEHhFAAH
t-TUCB[Figure (not displayed)]
0.8140
A-11[Figure (not displayed)]
5>10,000
A-19[Figure (not displayed)]
270
A-20[Figure (not displayed)]
41,100
A-24[Figure (not displayed)]
35,800
A-21[Figure (not displayed)]
2120
A-22[Figure (not displayed)]
3>10,000
A-25[Figure (not displayed)]
45,300

Since the substrates for FAAH tend to be relatively hydrophobic lipids, we speculated that conversion of the acid and primary amide to the corresponding esters or substituted amides would result in improved potency. The methyl ester (A-12) had 4-fold improved potency relative to the acid. Improving the bulk of the ester with an isopropyl group (A-13) results in a 11-fold loss in potency relative to the methyl ester. However, the similar potency of the benzyl ester (A-14) to the methyl ester demonstrates the bulk but not the size affects potency. Reversing the orientation of the ester (A-23) reduces the potency 3.4-fold. Relative to the primary amide, the methyl (A-18), ethanol (A-15) and glycyl (A-16) amides were all slightly less potent; however, the benzyl amide (A-27) was substantially less potent (16-fold). Generating the methyl ester of the glycyl amide (A-17) increased the potency 4-fold compared to the corresponding acid.

TABLE 4
Potency of ester and amide conjugates of t-TUCB
[Figure (not displayed)]
IC50 (nM)
R1hsEHhFAAH
t-TUCB[Figure (not displayed)]
0.8140
A-12[Figure (not displayed)]
735
A-13[Figure (not displayed)]
5400
A-14[Figure (not displayed)]
324
A-23[Figure (not displayed)]
4120
A-18[Figure (not displayed)]
2170
A-15[Figure (not displayed)]
2100
A-16[Figure (not displayed)]
2130
A-17[Figure (not displayed)]
330
A-27[Figure (not displayed)]
51,100

Patent 2024
Acids Adamantane Aldehydes Amides anisole Benzoic Acid Butanes Cyclohexane Dietary Fiber Enzymes Esters Ethanol inhibitors Lipids Nitriles Nitrogen Oxadiazoles Phenol piperidine Psychological Inhibition SOCS2 protein, human Urea

Example 7

Table 7 showed an improved stability of the disinfectant formulations upon including ethanol as a stabilizing agent in the formulations, wherein the disinfectant formulations comprised a mixture of lactic acid and formic acid as the C1-8 organic acids, and sodium sarcosinate as the amino acid based surfactant. Formulation Q, which did not include any ethanol stabilizing agent, was an unstable cloudy solution that resulted in a phase separation. Upon including ethanol stabilizing agent in the formulations (Formulations R and S), the stable clear solutions were achieved.

TABLE 7
FormulationQRS
IngredientsOn 100%On 100%On 100%
SLES 2EO/3EO1.01.01.5
SLS1.01.01.5
Sodium sarcosinate3.53.54.0
Glycerine0.90.90.9
Lactic acid8.08.07.0
Formic acid1.01.00.0
Ethanol00.50.5
WaterBal.Bal.Bal.
AppearanceCloudy solutionClear solutionClear solution
StabilityPhase separationStableStable

Patent 2024
Acids Amino Acids Ethanol formic acid Formic Acids Glycerin Lactic Acid Lupus Erythematosus, Systemic Microbicides Sodium Sodium Sarcosinate Stabilizing Agents Surface-Active Agents

Top products related to «Ethanol»

Whatman is a brand of laboratory filtration products and equipment manufactured by Cytiva. Whatman products are designed for a variety of laboratory applications, including sample preparation, purification, and analysis. The product line includes filter papers, membranes, and related accessories.
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Ethanol is a clear, colorless liquid chemical compound commonly used in laboratory settings. It is a key component in various scientific applications, serving as a solvent, disinfectant, and fuel source. Ethanol has a molecular formula of C2H6O and a range of industrial and research uses.
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TRIzol reagent is a monophasic solution of phenol, guanidine isothiocyanate, and other proprietary components designed for the isolation of total RNA, DNA, and proteins from a variety of biological samples. The reagent maintains the integrity of the RNA while disrupting cells and dissolving cell components.
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Propidium iodide is a fluorescent dye commonly used in molecular biology and flow cytometry applications. It binds to DNA and is used to stain cell nuclei, allowing for the identification and quantification of cells in various stages of the cell cycle.
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TRIzol is a monophasic solution of phenol and guanidine isothiocyanate that is used for the isolation of total RNA from various biological samples. It is a reagent designed to facilitate the disruption of cells and the subsequent isolation of RNA.
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Fetal Bovine Serum (FBS) is a cell culture supplement derived from the blood of bovine fetuses. FBS provides a source of proteins, growth factors, and other components that support the growth and maintenance of various cell types in in vitro cell culture applications.
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RNase A is a ribonuclease enzyme used in molecular biology laboratories. It functions by catalyzing the hydrolysis of single-stranded RNA, cleaving the phosphodiester bonds between nucleotides.
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DMSO is a versatile organic solvent commonly used in laboratory settings. It has a high boiling point, low viscosity, and the ability to dissolve a wide range of polar and non-polar compounds. DMSO's core function is as a solvent, allowing for the effective dissolution and handling of various chemical substances during research and experimentation.
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The RNeasy Mini Kit is a laboratory equipment designed for the purification of total RNA from a variety of sample types, including animal cells, tissues, and other biological materials. The kit utilizes a silica-based membrane technology to selectively bind and isolate RNA molecules, allowing for efficient extraction and recovery of high-quality RNA.
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Bovine serum albumin (BSA) is a common laboratory reagent derived from bovine blood plasma. It is a protein that serves as a stabilizer and blocking agent in various biochemical and immunological applications. BSA is widely used to maintain the activity and solubility of enzymes, proteins, and other biomolecules in experimental settings.

More about "Ethanol"

Ethanol is a versatile, colorless, and flammable liquid with a characteristic odor.
It is the primary type of alcohol found in alcoholic beverages and has numerous industrial and medicinal applications.
Ethanol can be produced through the fermentation of sugars, making it a widely used fuel, solvent, and disinfectant.
Researchers can leverage related terms like Whatman filter paper, TRIzol reagent, Propidium iodide, and Bovine serum albumin to enhance their ethanol-based studies.
PubCompare.ai's AI-driven platform offers a streamlined, data-driven approach to ethanol research, allowing scientists to compare protocols across literature, boost reproducibility and accuracy, and explore relevant kits like the RNeasy Mini Kit or DMSO to optimize their work.
By harnessing the power of PubCompare.ai, researchers can elevate the efficiency and quality of their ethanol-focused studies, driving meaningful discoveries and advancing the field.
Explore the platform now and take your ethanol research to new heights.