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124 protocols using 4 hydroxybenzaldehyde

1

Synthesis and Characterization of Flavonoids

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With the exception of the two novel flavones whose synthesis is described below, all flavonoids were procured from commercial vendors. Luteolin was obtained from R&D Systems Inc. (Minneapolis, MN, USA). All other flavones were purchased from Indofine Chemical Company Inc. (Hillsborough, NJ, USA). The tested compounds were solubilized in DMSO at 20 mM. Anhydrous acetone, anhydrous benzene, boron tribromide (BBr3), boron trifluoride (BF3) dibutyl etherate, deuterated dimethyl sulfoxide (DMSO-d6), deuterated chloroform (CDCl3), 1-(2,5-dihydroxyphenyl)ethenone, dimethyl sulfate (CH3)2SO4, absolute ethanol (EtOH), 3-fluoro-4-methoxy-benzoic acid, 4-hydroxy-benzaldehyde, 1-(2-hydroxy-5-methoxyphenyl)ethanone, hydroquinone, iodomethane, p-methoxybenzoyl chloride, oxalyl chloride, propionyl chloride, anhydrous pyridine, Selectfluor, sodium hydride (60% dispersion in mineral oil), sodium thiosulphate (Na2S2O3), trichlorofluoromethane (CFCl3), and triethylamine (TEA) were procured from Sigma-Aldrich Chemical Company (St. Louis, MO, USA). Acetic acid (AA), acetic anhydride, anhydrous acetonitrile (ACN), chloroform (CHCl3), dichloromethane (DCM), diethyl ether, anhydrous dimethylformamide (DMF), dimethylsulfoxide (DMSO), ethyl acetate (EtOAc), hexanes (Hex), hydrochloric acid (HCl), anhydrous magnesium sulfate (MgSO4), methanol (MeOH), potassium carbonate (K2CO3), potassium hydroxide (KOH), sodium bicarbonate (NaHCO3), sodium carbonate (Na2CO3), sodium chloride (NaCl), sodium hydroxide (NaOH), anhydrous sodium sulfate (Na2SO4), sulfuric acid (H2SO4), and HPLC grade water (H2O) were purchased from Fisher Scientific (Pittsburgh, PA, USA). Reactions were monitored via silica gel IB2-F thin-layer chromatography (TLC) plates from J.T. Baker (Phillipsburg, NJ, USA).
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2

Synthesis and Characterization of Metal Complexes

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This work employed reagent-grade chemicals from the Fluka company and Sigma-Aldrich, including MnCl2.4H2O (98% Fluka), FeCl2.4H2O (≥ 99.0% Fluka), and NiCl2.6H2O (≥ 98% Fluka), Thiosimcarbazide, 4-Hydroxybenzaldehyde (98% Sigma-Aldrich), and absolute ethanol (≥ 99.8% Fluka). On a Shimadzu 3800- FTIR spectrophotometer, CsI discs, Fourier Transfer Infrared Rays (FTIR) spectra were recorded in the range (4000–400) cm−1. Electronic spectra of products were recorded in the range of 200–1100 nm using a Shimadzu UV-1650 spectrophotometer, in freshly prepared 10–3 M ethanolic solutions. A Shimadzu A680G was used to measure the metals in the complexes-atomic absorption spectrophotometer. A capacitor analyzer was used to measure the conductivity of the complexes at 25 °C in a freshly prepared 10–3 M solution in Ethanol. The balanced magnetic susceptibility of Bruke magnet B.M.6, England, was used to collect magnetic properties. The melting points of the prepared compounds were determined using the Gallenkamp M.F.B-600 F Melting Point Apparatus.
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3

Synthesis of Vanillin-Based Compounds

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Vanillin, 4-hydroxybenzaldehyde, syringaldehyde, NaBH4, TBAI, tetrabutylammonium bromide (TBAB), SC, and anhydrous pyridine were purchased from MilliporeSigma Canada in Oakville, ON. Ethylene carbonate and 1,3-dibromopropane were purchased from Alfa Aesar in Ward Hill, MA. MDI, PDI, 1,4-diazabicyclo[2.2.2]octane (DABCO 33LV), SA, PDO, titanium (IV) triethanolaminato isopropoxide (8.2 Ti wt%) (Organotix TC-400), triethyl citrate (TEC), Tegostab B4113, and orange dye paste (Dye 2012C) were supplied by Evoco Ltd in Toronto, ON. Anhydrous THF was dried using an SPS solvent purification solvent. All other solvents were reagent grade and used as received. All reactions carried out in a nitrogen environment were performed using standard Schlenk line techniques.
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4

Synthesis and Characterization of Hydrazide-Hydrazones

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All commercially available chemicals were purchased as pure for synthesis or analytical grade reagents (Sigma-Aldrich, St. Louis, MO, USA; ARMAR, Muligasse, Switzerland; Fluka Hamburg, Germany; Loba Feinchemie AG, Fischamend Austria; POCh Gliwice, Poland) and solvents were primarily used without further purification. In particular, 4-hydroxybenzoic acid hydrazide (36), acetic acid hydrazide (37), benzaldehyde (41), 3-phenylpropionaldehyde (42), 4-methylbenzaldehyde (43), 4-iso-propylbenzaldehyde (44), benzaldehyde-2-sodiumsulfonate (45), salicylic aldehyde (46), 3-hydroxy-benzaldehyde (47), 4-hydroxybenzaldehyde (48), 2-methoxybenzaldehyde (49), 3-methoxy-benzaldehyde (50), anisaldehyde (51), gentisaldehyde (52), vanillic aldehyde (56) (LobaFeinchemie), 3-tert-butyl-salicylic aldehyde (57), 2,4-dihydroxy-benzaldehyde (59), 3,5-di-tert-butyl-salicylic aldehyde (64), nicotinic acid methyl ester (76), 4-methoxybenzoic acid (77), and benzoic acid (78), syringaldazine (SNG, 4-hydroxy-3,5-dimethoxybenzaldehyde azine), guaiacol (2-Methoxyphenol), dimethyl sulfoxide for plant cell culture, laccase from Trametes versicolor in lyophilized powder were bought from Sigma-Aldrich. vanillic aldehyde (56) was purchased from Loba Feinchemie. The 5-nitro-2-furfural diacetyl acetal (69) and phloroglucinol (73) were purchased from Fluka. Inorganics, citric acid monohydrate, and sodium phosphate dibasic dodecahydrate were purchased from POCh. The 99.8 atom % D solvents for NMR spectroscopy, chloroform-d1 (CDCl3), and dimethyl sulfoxide-d6 (DMSO-d6) and ethanol (95%) for biological tests were purchased from ARMAR (Muligasse, Switzerland) and were used without further purification.
Methanol was distilled prior to the condensation reaction from Mg element shavings in the presence of I2. Analytical TLC was performed on PET foils precoated with silica gel (Merck silica gel, 60 F254) and was made visual under UV light (λmax = 254 nm) or by staining with iodine vapor. Melting points were determined on an Electrothermal IA 91100 digital melting-point apparatus (Sigma-Aldrich, Saint Louis, MO, USA) using the standard open capillary method. FT-IR spectra (4000–400 cm−1) were recorded on a 2000 FT-IR (Perkin–Elmer, Manchester, UK) or VERTEX 70V spectrometer (Bruker, Ettlingen, Germany) using a diamond ATR accessory. Absorption maxima are reported in wavenumbers (cm–1). 1H-NMR and 13C-NMR spectra were recorded on Jeol 400yh (Tokyo, Japan) (399.78 MHz for 1H and 100.52 MHz for 13C) at 295 K. Chemical shifts (δ) are given in parts per million (ppm) downfield relative to TMS, and coupling constants (J) are in Hz. Residual solvent central signals were recorded as follows: DMSO-d6, δH = 2.500 ppm, δC = 39.43 ppm; CDCl3, δH = 7.263 ppm, δC = 77.00 ppm. When measured, DEPT and ATP experiments signals are referred to as (+) or (–). High-resolution mass spectra (HRMS) were recorded on a LCD Premier XE instrument (Waters, Manchester United, UK), and only the [M + H]+ or [M + Na]+ molecular species were reported.
The literature procedure was adapted for the preparation of hydrazide–hydrazones 13, 511, 1425, 2730 [48 (link)], 32 [71 ], 31, and 3335 [47 (link)]; hydrazides 3840 [47 (link)]; aldehydes 5355, 58, 61, 62 [48 (link),89 (link)], 60 [66 (link)], 63 [67 (link)], 65 [48 (link),90 (link)], 66, 67 [48 (link)], and 68 [69 (link)]; and phenol 72 [68 (link)].
Purity and homogeneity of known compounds were confirmed by measuring their m.p. for 13, 511, 1421, 24, 25, 2730 [48 (link)], 12 [91 (link)], 31, 3335 [47 (link)], 32 [71 ], 38 [48 (link)], 39 [92 (link),93 (link)], 40 [47 (link),93 (link)], 60 [94 (link)], 63 [67 (link)], and 68 [69 (link)]; boiling points for 65 [48 (link)] and 68 [67 (link)]; FT-IR spectra for 3 [48 (link)], 22 [95 (link)], 25 [48 (link)], 38, 39 [52 (link)], 40 [47 (link)], and 68 [69 (link)]; 1H-NMR spectra for 3 [48 (link)], 4 [96 (link)], 12 [97 (link)], 13 [98 ], 22 [99 (link)], 23 [41 (link)], 25, 28 [48 (link)], 38, 39 [52 (link)], 40 [47 (link)], 60 [66 (link)], 65 [48 (link)], and 68 [69 (link)]; 13C-NMR spectra for 3 [48 (link)], 4 [96 (link)], 22 [95 (link)], 25, 28 [48 (link)], 38, 39 [52 (link)], 40 [47 (link)], 65 [48 (link)], and 68 [69 (link)]; and/or HRMS for 3 [48 (link)], 4 [96 (link)], 22 [95 (link)], 25, and 28 [48 (link)] and comparing them with literature data. Two new aroylhydrazide–hydrazones, 26 and 32, were fully characterized. The position of hydrogen and carbon atoms in the NMR data was determined by supporting the standard dept-135 experiment and by 2D map analysis of Heteronuclear Multiple Quantum Correlation (HMQC), Heteronuclear Single Quantum Coherence (HSQC), Heteronuclear Multiple Bond Correlation (HMBC), and Nuclear Overhauser Enhancement Spectroscopy (NOESY) experiments, if measured. The spectra images of FT-IR and NMR for the following compounds are placed in the Supplementary Materials.
The cultures of Botrytis cinerea strain FBc05 and Sclerotinia sclerotiorum strain FSc10 were obtained from the collection of the Division of Plant Pathology and Mycology at the Department of Plant Protection of Wroclaw University of Environmental and Life Sciences (Poland). Cerrena unicolor (Bull.ex.Fr.) Murr, strain no. 139, originated from the culture collection of the Department of Biochemistry, University of Lublin (Poland). The stock cultures were maintained on potato dextrose agar at +4 °C and periodically transferred to a fresh medium.
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5

Synthesis of Aromatic Aldehyde Derivatives

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4-Hydroxybenzaldehyde,
4-nitrobenzaldehyde, 4-fluorobenzaldehyde, 4-chlorobenzaldehyde, 4-anisaldehyde,
4-(dimethylamino)benzaldehyde, hydrazine hydrate, 4-octoyloxybenzoic
acid, and 4-dodecyloxybenzoic acid were purchased from Sigma-Aldrich
(Germany). Dichloromethane, N,N′- dicyclohexylcarbodiimide
(DCC), ethanol, and 4-dimethylaminopyridine (DMAP) were purchased
from Aldrich (Wisconsin, USA).
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6

Quantification of Carbonyl Compounds

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Ultrapure water was obtained from a Milli-Q
water purification system (Millipore). Furfural (99%), 5-hydroxymethylFurfural
(99%), benzaldehyde (99%), 4-hydroxy-benzaldehyde (99%), vanillin
(99%), acetonitrile (≥99%), butyraldehyde (98%), pentaldehyde
(98%), methanol, hydrochloric acid (HCl, 35%), 2,4-dinitrophenylhydrazine
(DNPH, 97%), sodium hydroxide (97%), 4-amino-3-hydrazino-5-mercapto-1,2,4-triazole
(Purpald, 99%), sodium periodate (98%), formaldehyde (37 wt % in H2O purity), deuterium oxide (D2O, 99.9 atom %),
dimethyl sulfoxide-d6 (99.8 atom %), and chloroform-d (99.8 atom %)
were provided by Sigma-Aldrich (St. Louis, MO). All chemicals were
used without further treatment.
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7

Pyrrole-Based Dye Synthesis and Characterization

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Pyrrole (97%) was distilled before use, graphite powder (99%), and Acid Orange 7 dye (dye content ≥ 85%) was purchased from (Merck Darmstadt, Germany). 4-hydroxybenzaldehyde (98%) and propionic acid (99.5%), Chitosan medium Mwt with high purity (Mwt 150,000 g/mol, degree of deacetylation 81%), N,N-dimethylformamide (DMF) (99.8%), and cobalt (II) chloride hexahydrate (≥ 97%) were obtained from (Sigma-Aldrich). Hydrazine hydrate (80%), chloroacetyl chloride (> 99%), phthalic anhydride (98%), and triethylamine (99%) were obtained from (Alpha-Chemika, India). (El-Nasr Pharmaceutical Chemicals, Egypt) supplied chloroform (99.4%), methylene chloride (99.9%), methanol (99.9%), concentrated sulfuric acid (99%), phosphoric acid (99%), sodium carbonate, potassium permanganate, and hydrogen peroxide (30%, as an oxidant), and its initial concentration was determined using potassium permanganate43 . Silica gel (60–120 mesh) was purchased from (Fisher Co., New Jersey, USA).
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8

Pretreatment of Corncob Biomass

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Corncob was composed of 34.5% cellulose, 30.9% hemicellulose, and 22.7% lignin. After pretreatment with dilute sulfuric acid at 160 °C for 60 min, the remaining solid residue was composed of 54.6% cellulose, 3.1% hemicellulose, and 32.3% lignin. The hydrolysate pretreatment was kindly provided by a biomass factory in China. Syringaldehyde and ferulic acid were purchased from TCI (Shiga, Japan). 4-hydroxybenzoic acid, vanillic acid, syringic acid, 4-hydroxybenzaldehyde, vanillin, and p-coumaric acid were purchased from Sigma-Aldrich (Saint Louis, MO, USA).
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9

Yeast Transformation and Lignin Degradation

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Yeast Transformation Kit, 2,6-Dimethoxyphenol (DMP), Guaiacol (GUA), Vanillin (VAI), 4-Hydroxybenzaldehyde (HBA), Syringaldehyde (SYR), p-Coumaric acid (PCA), Ferulic acid (FA), Sinapic acid (SA), N,N-Dimethyl-1,4-phenylenediamine (DMPD), p-Phenylenediamine (PPD), 1,2-Phenylenediamine (OPD), Aniline (ANL), o-Dianisidine (ODN), Remazol Brilliant Blue R (RBB), Evans Blue (EB), Aniline Blue (AB), Methyl Orange (MO), Reactive Black 5 (RB5), Iron (II) Sulphate, Manganese (II) Sulphate and FerroZine Iron Reagent were purchased from Sigma-Aldrich. High Pure Plasmid Isolation Kit and 2,20-Azino-bis (3-ethylbenzothiazoline-6-sulphonic acid) (ABTS) were obtained from ROCHE. Phusion High Fidelity DNA polymerase and Restriction enzymes were purchased from New England Biolabs. QIAquick gel extraction kit from Qiagen. Zymoprep Yeast Plasmid Miniprep II was purchased from Zymo Research. S. cerevisiae BJ5465 strain was purchased from LGC Promochem and A. oryzae strain from Novozymes A/S. H. annosum s. l. genome, belongs to the Heterobasidion irregulare TC31–2 strain accessible in MycoCosm portal from JGI.
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10

Synthesis and Characterization of Novel Compounds

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Malonic acid, tetrahydrofuran (THF), pyridine, piperidine, the deuterated solvent (DMSO-d6) for NMR analysis, polyvinyl alcohol (PVA), hydrochloric acid, 4-hydroxybenzaldehyde, ethanol, sodium, chloroform, potassium hydroxide, and silver nitrate were products of Sigma Aldrich (Saint Louis, MO, USA). Collagen types I and II were purchased from Proteintech Group Inc. (Chicago, IL, USA). Microbial strains were purchased from BioVitrum (Saint Petersburg, Russia). The antibiotic Nitox was purchased from NITA-FARM (Saratov, Russia).
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