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5 protocols using «gold particles»

1

Immunogold Labeling of Extracellular Vesicles

2025
Fixed EV specimens (4% PFA in PBS mixed 1:1 with EV) were placed onto 10 min UV irradiated 300 mesh formvar/carbon coated grids and allowed to absorb to the formvar for 5 min. For immunogold staining, the grids were placed into 20 µL 0.01% Tween/PBS (10 min) and after that into a blocking buffer (0.5% fish gelatin with 0.1% ovalbumin in PBS) for a block step for 1 h. Without rinsing, the grids were immediately placed into the primary antibody (diluted in a blocking buffer) at the appropriate dilution overnight at 4 °C (1:100 anti-CD9 Abcam (Cambridge, UK), ab236630). As controls, some of the grids were not exposed to the primary antibody. The next day, all the grids were rinsed with PBS then floated on drops of the appropriate secondary antibody attached with 10 nm gold particles (AURION 1:30) for 2 h at room temperature (RT). Grids were rinsed 3 times with PBS and were placed in 1% glutaraldehyde (in PBS) for 5 min. After rinsing in PBS and distilled water, the grids were stained for contrast using 2% uranyl oxalate solution (pH 7 for 5 min in the dark). Afterwards, the grids were incubated in drops of methyl cellulose-uranyl oxalate (8 parts 2% methyl cellulose, 1 part ddH2O, 1 part 4% uranyl acetate (in water), pH 4, sterile filter) for 10 min on ice (dark) [61 (link)]. After that, the grids were removed with stainless steel loops and excess fluid was blotted by gently pushing on Whatman filter paper. After air-drying, the samples were examined and photographed with a Zeiss EM10 electron microscope (Zeiss, Jena, Germany) and a Gatan SC1000 Orius™ CCD camera (GATAN, Munich, Germany) in combination with the DigitalMicrograph™ software 3.1 (GATAN, Pleasanton, CA, USA). Images were adjusted for contrast and brightness using Adobe Photoshop CC 2018 (Adobe Systems, San José, CA, USA).
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2

Plunge-Freezing and Cryo-EM Preparation of Microbial Cultures

2023
For plunge-freezing, 1 ml of each culture was harvested, centrifuged for 5 min at 5000 g, washed briefly in TBS buffer, and resuspended in TBS prior to plunge-freezing. To minimize exposure to atmospheric oxygen, care was taken to plunge-freeze cells within 60 min of removing them from anaerobic culture. In parallel, 16S rRNA Sanger sequencing served to confirm the purity of the microbial cultures.
Cryo-EM samples were prepared by plunge-freezing into liquid ethane. A volume of 5 µl of bacteria diluted to OD = 0.15 in PBS were deposited on a glow-discharged Quantifoil R2/1 holey carbon grids (Quantifoil Micro Tools GmbH, Germany). A volume of 3 µl gold particles (10 nm BSA tracer, Aurion) concentrated 5-fold by centrifugation and resuspension in PBS were added. The grids were manually blotted for 4 s and vitrified by rapidly plunging into liquid ethane using a home-built plunging apparatus. The frozen samples were stored in liquid nitrogen until imaging.
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3

Synthesis and Characterization of Pt and Au Nanoparticles

2019
Platinum nanoparticles (Pt-PEG-17, referred to as Pt-NPs) were prepared as explained in the recently submitted French patent (FR 1900008). Briefly: Pt-NPs were synthetized by γ-ray water radiolysis of Pt containing salt and embedded with polyethylene glycol (PEG) to increase their biocompatibility. Pt-NPs were mainly spherical with an average platinum core diameter of 2.6 nm. Preliminary results were obtained also for gold nanoparticles (Au-NPs) which are composed of a Au core of 2.4 nm encapsulated by the dithiolated polyaminocarboxylate (DTDTPA) shell. For SkBr3 Au-NPs incorporation, 8 µL of 10 nm-sized gold particles (Aurion, Wageningen, The Netherlands) were added to the medium in each well 16 h prior to irradiation in order to obtain a maximum uptake in the cell cytoplasm via diffusion (Figure 6) [53 (link),75 (link)]. In other experiments 2.6 nm Pt-NPs or 2.4 nm Au-NPs were added to the medium 6 h before irradiation at 0.5 mM concentration.
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4

3D Modeling of Fibrils and Lipid Vesicles

2017
Specimen preparation was mainly carried out as described before28 (link). In brief, 700 nm-thick sections were cut off from the epoxy resin block parallel to the plane of the sapphire disc with an Ultracut UCT ultramicrotome (Leica) equipped with a diamond knife (Diatome). Before mounting the slice onto a 300 mesh copper grid, the grid was plasma-cleaned with an Edwards plasma cleaning system and dried for 10 min at room temperature. Afterwards, a droplet of 10% (w/v) poly-L-lysine (Sigma Aldrich) in water was added on the sample and dried for 5 min at 37 °C. The grid with the slice on it was treated on both sites with 15 μl of a solution containing 25 nm gold particles (Aurion) diluted 1:1 with water. Finally, the grid was coated on both sites with a 5 nm carbon layer using a BAF 300 electron beam evaporation device (Balzers). Images were recorded in the STEM mode with a Jeol JEM-2100F (Jeol) with an acceleration voltage of 200 kV and a bright field detector (Jeol) at a size of 1,024 × 1,024 pixels. Images were recorded at different tilt angles ranging from −70° to +70° with a tilt increment of 1.5°. The complete tilt series contained 94 individual images. Each image was acquired with an exposure time of 22 s. To generate a 3D model of the individual images, the images were first aligned to an image stack and subsequently reconstructed computationally using a weighted back-projection algorithm. The final generation of the 3D model was done by tracing the fibrils and lipid vesicles manually within different virtual sections of the tomogram. The reconstruction and 3D modeling was carried out using the IMOD software package43 (link) version 4.7.12.
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5

Immunogold Labeling of Exosomes for TEM

2016
Labeling of cell-derived exosomes was performed as previously described [47 (link)]. Briefly, exosomes attached on formvar-carbon coated grids were successively washed, fixed in 2% formaldehyde and incubated with primary (2 h, RT, anti-MYOF (Cat. #: HPA014245; Sigma Aldrich, St. Louis, MO, USA) 1/20 dilution in PBS-BSA 0.2% supplemented with normal goat serum 1/50) and secondary antibodies (1 h, RT, anti-rabbit coupled with gold particles (Aurion, Wageningen, The Netherlands) diluted 1/40 in PBS-BSA 0.2%, pH 8.2) for 1 h. Samples were postfixed for 10 minutes in 2.5% glutaraldehyde and counterstained using uranyl acetate and lead citrate. Pictures were made with a Jeol JEM-1400 transmission electron microscope (TEM) at 80 kV (Jeol, Peabody, MA, USA). When immunogold labeling was not required (structural observations), exosome preparation for TEM commenced with fixation step.
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