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85 protocols using horseradish peroxidase hrp conjugated secondary antibody

1

Immunofluorescence and Western Blot Analysis of B7-H3 in GBM

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GBM cells were incubated in 24-well plates with poly-L-lysine-treated coverslips at 37°C. After 24 h, specimens were stained with primary antibody or scFv-Fc for 1 h at 4°C and fixed in 4% paraformaldehyde in PBS for 15 min. The slides were stained in turn by a Cy3-conjugated secondary antibody (Proteintech) and DAPI (Beyotime). The immunofluorescent staining was imaged by confocal microscopy.
Western blots were used to probe for B7-H3 expression in isolated glioma primary cells and GBM cell lines. Cells were lysed in radioimmunoprecipitation (RIPA) buffer supplemented with protease inhibitor cocktail (Sigma) for 15 min and then centrifuged at 10,000 × g for 15 min at 4°C. Protein concentrations were determined with a BCA protein assay kit (Thermo Fisher Scientific). Equal amounts of protein were loaded on 10% SDS-PAGE gel and subsequently transferred onto polyvinylidene fluoride (PVDF) membranes (Millipore). After blocking in 5% skimmed milk, the membranes were incubated with anti-B7-H3 (1:500, Santa Cruz, F-11) or anti-GAPDH (1:1,000; Beyotime, AF0006) primary antibody overnight. Horseradish peroxidase (HRP)-conjugated secondary antibody (1:2,000; Beyotime, A0216) was used at a dilution of 1:2,000. Western blot results were visualized using ChemiScope 6000 Touch (Clinx).
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2

Western Blot Analysis of Inflammatory Markers

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The proteins were extracted from the cells with radioimmunoprecipitation assay (RIPA) buffer (Beyotime Biotechnology), and the concentration was measured using a bicinchoninic acid (BCA) kit (Beyotime Biotechnology). Sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) was performed to separate proteins and the cells were then transferred to the polyvinylidene fluoride membranes (PVDF; Bio-Rad, Hercules, CA, USA). The membranes were blocked with 5% bovine serum albumin (BSA) for 1 hour and incubated with TLR-4 (1:500, Beyotime Biotechnology), NLRP3 (1:500, Beyotime Biotechnology), p-p65 (1:500, Beyotime Biotechnology), Caspase-1 (1:500, Beyotime Biotechnology), or GAPDH (1:500, Beyotime Biotechnology) primary antibodies at 4 ℃ overnight. Subsequently, the membranes were incubated with horseradish peroxidase (HRP)-conjugated secondary antibody (1:500, Beyotime Biotechnology) at room temperature for 1 hour, and then the bounded secondary antibody was visualized using chemiluminescence (Beyotime Biotechnology).
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3

Chondroprotective Effects of Celastrol in OA

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All chemicals and reagents were obtained commercially and were analytical grade. Hexadecyl trimethyl ammonium bromide (CTAB), tetraethyl orthosilicate (TEOS), 3-glycidoxypropyltrimethoxysilane (GPTMS), aqueous ammonia, sodium carbonate, ethanol, acetic acid and methyl alcohol were obtained from Sinopharm Chemical Reagent Co, China.
0.2% trypsin was obtained from Hyclone, USA. Dulbecco’s modified Eagle’s medium (DMEM) and 1% penicillin/streptomycin were obtained from Thermo Fisher Scientific, USA. Monosodium iodoacetate (MIA) was obtained from Aladdin Industrial Co, China. 10% fetal bovine serum (FBS) and 5% bovine serum albumin (BSA) were obtained from Jackson Immuno Research Inc. USA. Phosphorylated p65, p65, phosphorylated IKKβ, IKKβ, phosphorylated IκBα, IκBα primary antibodies were obtained from Cell Signaling Technology, USA. Collagenase, Celastrol (CSL) and interleukin 1β (IL-1β) were obtained from Sigma-Aldrich, USA. Ethylenediaminetetraacetic acid (EDTA), 10% paraformaldehyde, horseradish peroxidase (HRP)-conjugated secondary antibody, Cell Counting Kit-8 (CCK-8), RIPA lysis buffer, BCA Protein Assay Kit and enhanced chemiluminescence (ECL) detection kit were obtained from Beyotime Institute of Biotechnology, China.
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4

Evaluating Pancreatic Protein Levels

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Pancreatic levels of Bcl-2, Bax and pancreatic duodenal homeobox-1 (PDX-1) protein were evaluated by western blot analysis. Total proteins were extracted with RIPA lysis buffer (Beyotime institute of Biotechnology, Haimen, China) supplemented with 1 mmol/L phenylmethanesulfonyl fluoride (PMSF, Sigma, MO, USA), followed by determination of protein concentrations by bicinchoninic acid (BCA) method (Beyotime institute of Biotechnology, Haimen, China). Then protein samples were subjected to SDS-polyacrylamide gel electrophoresis (Bio-Rad, CA, USA) and transferred to nitrocellulose membrane (Millipore, MA, USA). After blocking with 5 % skimmed milk in TBS containing 0.2 % Tween-20 (TBST), the membrane was incubated overnight at 4 °C with primary antibodies against Bcl-2, Bax, PDX-1 (Santa Cruz, CA, USA) and β-actin (Beyotime institute of Biotechnology, Haimen, China), followed by incubation with horseradish peroxidase (HRP) conjugated secondary antibody (Beyotime institute of Biotechnology, Haimen, China) for 1 h at room temperature. Bound HRP was visualized with an enhanced chemiluminescence substrate (ECL, Beyotime institute of Biotechnology, Haimen, China) and protein bands were analyzed for integrated optical density (IOD) with Quantity One software (Bio-Rad, CA, USA). The levels of PDX-1, Bcl-2 and Bax were normalized to that of β-actin.
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5

Protein Extraction and Western Blot Analysis

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The tissue samples or cultured cells were lysed on ice for 30 min in RIPA buffer (Beyotime), supplemented with protease inhibitor cocktail (Roche Applied Science, Indianapolis, IN, USA). After centrifugation (12,000g) at 4°C for 20 min, the supernatant was harvested and the protein concentration was determined by using BCA assay kit (Thermo Fisher Scientific). Protein extracts were separated by sodium dodecyl sulfate–polyacrylamide gel and electroblotted onto a nitrocellulose membrane. To block the non-specific binding sites, the membranes were incubated with 5% non-fat milk at room temperature for 60 min, and then probed with primary antibodies overnight at 4°C. After washing three times with Tris-buffered saline with 0.1% Tween-20 (TBST), the membranes were incubated with the horseradish peroxidase (HRP)-conjugated secondary antibody (Beyotime, Shanghai, China) at room temperature for 1 h. The specific proteins in the blots were visualized by using enhanced chemiluminescence (ECL, Millipore, Bredford, USA). The densities of the protein bands were quantified using Image J software (NIH, USA).
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6

Western Blotting of MKN-45 Cells

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MKN-45 cells were incubated with the test compound at various concentrations for 24 h. After incubation, cells were harvested in PBS solution containing proteinase inhibitors and phosphatase inhibitors, and then sonicated. Whole cell lysates were separated by sodium dodecyl sulphate-polyacrylamide gel electrophoresis (SDS-PAGE) and transferred to nitrocellulose membrane (Beyotime Biotechnology, Shanghai, China). The membrane was incubated with primary antibody followed by labelling with horseradish peroxidase (HRP)-conjugated secondary antibody (Beyotime Biotechnology, Shanghai, China). The blots were developed with enhanced chemiluminescence and visualised by an LAS4000 imager (Fuji Photo Film, Minato City, Japan).
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7

Immunohistochemical Detection of Hsp60 in Mouse Pancreas

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The expression of in situ Hsp60 protein in pancreas was detected by immunohistochemistry, with the same protocol as the former [10 (link)]. Slides of the paraffin section of mouse pancreatic tissue dewaxed, hydrated, and heat-mediated antigen retrieval, and then blocked in 5% bovine serum albumin (BSA) (Sangon Biotech, Shanghai, China) for 1 h at room temperature. The slides were subsequently incubated with rabbit anti-Hsp60 antibody (1:600 diluted) (Enzo, Pennsylvania, USA) overnight at 4 °C, and horse radish peroxidase (HRP)-conjugated secondary antibody (Beyotime, Shanghai, China) for 2 h at room temperature. Finally, the slides were stained with diaminobenzidine (DAB) (Sangon Biotech, Shanghai, China) and hematoxylin.
Positive signals with brownish staining were observed under microscopy. Images were captured by Motic Med 6.0 (Motic Software Engineering Co. Ltd., Xiamen, China), and the optical density (OD) of the positive signals was measured semi-quantitatively by the software of Image J. Results were presented as a percentage of the NS1h group.
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8

Protein Expression Analysis of Sciatic Nerve

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The total protein of sciatic nerve tissue was extracted. First, the nucleus protein was extracted by nucleus protein extraction kit (Beyotime Bio, China). The content was detected by BCA protein detection kit (Thermo, Waltham, MA) according to the instructions. Then, the protein (30 µg/samples) with 10% SDS-PAGE was isolated and transferred to the PVDF membrane, sealed in 5% skim milk under 25°C for 1 h, and incubated with primary NF-B P65 (1:2000, Abcam Biotech, Cambridge, MA, USA), Caspase1 (1:1000, Abcam), Pro-Caspase1 (1:1000, Cusabiao, Wuhan, China), GSDMD-N (1:1000, Abcam), Klotho (1:1000, Abcam), NLRP3 (1:1000, Abcam), GAPDH (1:2500, Abcam) and H3 (1:2000, Abcam). And then, it was incubated with horseradish peroxidase (HRP)-conjugated secondary antibody (Beyotime, Shanghai, China) for 1 h. After that, protein bands were detected with a ECL detection kit (Beyotime Biothech, Shanghai, China), GAPDH or H3 was taken as control.
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9

Protein Expression Analysis by Western Blot

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Cells of each group were collected and lysed by lysis buffer (Beyotime Biotechnology, China). The proteins were extracted and separated by SDS-PAGE, and were then transferred onto PVDF membranes. After blocking with 1% BSA for 1 h at room temperature (RT), the membranes were incubated with antibodies against GFP, Flag FAM289 (FAM92A1 Antibody), anti-Galectin-1, H3, ERK, NF-κB, DNMT1, DNMT3B, Galectin-1, SOX2, OCT4, CD133, C-Myc, GAPDH, anti-pERK1/2 and pNF-κB (The details of antibodies are provided in Additional file 6: Table S4) at 4 °C overnight. After washing 3 times with TBST, the membranes were incubated with the horseradish peroxidase (HRP)-conjugated secondary antibody (1:1000, Beyotime Biotechnology, China) at RT for 1 h. Then the membranes were washed 3 times with TBST and imaged with a gel imaging system (BIO-RAD, USA).
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10

Western Blot Protein Detection Procedure

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Cells or tissues were lysed in RIPA Lysis Buffer (Solarbio). After being centrifuged at 12 000×g for 10 min, the supernatant was collected and the concentration was detected using the BCA Protein Assay Kit (Thermo Fisher). Then, the protein samples were loaded in the 10% polyacrylamide gels and separated by sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE). The target proteins were transferred onto nitrocellulose membranes (Millipore, Bedford, MA, USA). Subsequently, the membranes were blocked with 5% nonfat milk or 3% bovine serum albumin (BSA) for 1 h at room temperature. The primary antibodies were diluted to appropriate concentrations with the blocking solution and incubated with the membranes overnight at 4°C. After incubation with the horseradish peroxidase (HRP)-conjugated secondary antibody (Beyotime, Nanjing, Jiangsu, China) for 1 h at 37°C, the proteins were visualized and detected using Tanon 5200 chemiluminescent imaging system (Tanon, Shanghai, China).
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