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31 protocols using suprapur nitric acid

1

Evaluating Cellular Responses to ZnO Nanoparticles

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Alpha-amylase, CaCl2 ∙ 2H2O, 4′,6′-diamidino-2-phenylindole (DAPI), 2′,7′-dichlorofluorescin-diacetate (DCFH-DA), MgCl2 ∙ 6H2O, mucin, ox bile, pancreatin, paraformaldehyde, pepsin, trypsin and ZnO nanopowder (#677450 and #544906) were purchased from Sigma-Aldrich Chemie GmbH, Taufkirchen, Germany. Dulbecco’s Modified Eagle Medium (DMEM), foetal bovine serum (FBS), non-essential amino acids, penicillin/streptomycin, and trypsin/EDTA were obtained from PAN-Biotech GmbH, Aidenbach, Germany. 3-(4,5-Dimethylthiazol-2-yl)-2,5-diphenyl tetrazolium bromide (MTT), dimethyl sulfoxide, fluorescein isothiocyanate (FITC)-dextran, hydrogen peroxide (30%), nitric acid (Suprapur), and triton X-100 were acquired from Merck KGaA, Darmstadt, Germany. 2-((3-Chlorophenyl) hydrazinylidene) propanedinitrile (CCCP) and ZnCl2 were procured from Thermo Fisher Scientific Inc., Waltham, MA, USA. Carbamide, ethylene glycol tetraacetic acid (EGTA), KCl, KH2PO4, NaCl, NaHCO3, and Na2HPO4 ∙ 2H2O were purchased from Carl Roth GmbH & Co. KG, Karlsruhe, Germany. Cacodylic acid and glutaraldehyde were bought from Serva Electrophoresis GmbH, Heidelberg, Germany. 5,5′,6,6′-Tetrachloro-1,1′,3,3′-tetraethylbenzimidazolylcarbocyanine iodide (JC-1) was obtained from Enzo Life Sciences GmbH, Lörrach, Germany. Phalloidin-iFlour 488 reagent was acquired from Abcam plc., Cambridge, UK.
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2

Platinum Uptake Kinetics in Tumor Cells

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The kinetic of cisplatin uptake by A2780 and A2780cis tumors was analyzed by graphite furnace atomic absorption spectrometry (GF-AAS). Tumor samples were taken at the indicated time points and snap frozen. At time of detection, tumors were dissected with a scalpel, lysed with 65% nitric acid suprapur® (Merck Chemicals, Schwalbach, Germany) for one hour at 80 °C followed by GF-AAS investigation, as indicated before [16 (link)]. Measured platinum concentrations were related to the tumor weights.
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3

Microwave Digestion Protocol for Elemental Analysis

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The ICP standard solutions were purchased from Merck (Darmstadt, Germany): multielement standard IV with 23 elements and single-element standards of calcium (Ca), lutetium (Lu), and rhenium (Re), each with a concentration of 1000 mg/L. Lutetium and rhenium were used as internal standards (ISTD1 and ISTD2) for error correction in the sample introduction and for correction of vaporizing effects during the microwave digestion of the solid samples. 12 Nitric acid Suprapur (65%) and hydrochloric acid Suprapur (30%), purchased from Merck, and ultrapure water were used to prepare the microwave digestion, calibration solutions, diluted samples, and rinsing solutions. The methods were validated using self-made reference material containing calcium oxalate, cholesterol, ICP multielement standard IV, and potato starch. 29 To reduce inhomogeneities of this material, it should be new prepared prior to the validation experiments and mixed carefully before weighting.
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4

Synthesis and Characterization of DGA Ligands

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The multiple DGA-containing ligand LI was prepared as reported.23 (link)LII was prepared following an analogous method, details of which are given in the ESI. The purity of the ligands was checked by elemental analysis, NMR and HR-MS techniques. The diluents, n-dodecane and isodecanol (>99% purity), were procured from Lancaster, UK and SRL, Mumbai, respectively, and were used as obtained. HTTA (2-thenoyltrifluoroacetone) was obtained from Sigma-Aldrich (USA) and was used after recrystallization. Suprapur nitric acid (Merck, Germany) was used for the preparation of dilute nitric acid solutions applied in this study, which were standardized using volumetric methods using AR grade NaOH (BDH) with phenolphthalein (Fluka, Switzerland) as the indicator.
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5

Trace Metal and Phenolic Acid Analysis

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Suprapur® nitric acid (65%) and Suprapur® hydrogen peroxide (30%) were purchased from Merck (Darmstadt, Germany). Quadruple-distilled water with a conductivity of less than 1 µS/cm was obtained using an S2–97A2 distillation apparatus (Chemland, Stargard Szczecinski, Poland). Standards of Zn(II), Fe(III), Mn(II), Mg(II), and Cu(II) at concentrations of 1 g/L were purchased from the District Office of Measures in Łodz, Poland.
The reagents used for the analysis of phenolic acids in the samples were as follows: MeOH and glacial acetic acid of analytical grade were purchased from Chempur, and MeOH of HPLC grade was purchased from Merck. The following standards were purchased: caffeic acid, chlorogenic acid, neochlorogenic acid, and rutoside (Sigma Aldrich, St. Louis, MI, USA); cryptochlorogenic acid, isochlorogenic acid, 4-feruloylquinic acid, and astragalin (ChromaDex, Los Angeles, CA, USA); and caffeine (Fluka Chemie AG, Buchs, Switzerland).
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6

Antioxidant and Cholinesterase Inhibition Assays

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Reagents for antioxidant activities and cholinesterase inhibition assays were from Sigma-Aldrich (St. Louis, MO, USA and Steinheim, Germany), except magnesium chloride hexahydrate, which was bought from VWR (Leuven, Belgium), sodium chloride from Fisher Scientific (Fair Lawn, NJ, USA), sodium nitroprusside dihydrate from Fluka, and sodium carbonate from Merck. Hydrogen peroxide 35.5% w/w was purchased from Labchem (Zelienople, PA, USA). Methanol Chromasolv for HPLC was from Riedel-de Haën (Seelze, Germany), and formic acid was from Carlo Erba (Val de Reuil, France). The standards used for HPLC analyses were acquired from Sigma-Aldrich (4-O-caffeoylquinic acid, quercetin-3-O-rutinoside hydrate, protocatechuic acid, ferulic acid, and p-coumaric acid), Fluka (caffeic acid), Alfa Aesar (5-O-caffeoylquinic acid), and Extrasynthèse (Genay, France): 3-O-caffeoylquinic acid, apigenin-8-C-glucoside, apigenin-6-C-glucoside, quercetin-3-O-glucoside, kaempferol-3-O-glucoside, kaempferol-3-O-rutinoside, and tiliroside. Ultrapure water (with resistivities of 18.2 MΩ/cm) was obtained using a Milli-Q water purification system from Millipore (Molsheim, France). Standard solutions of Pb and Cd, Atomic Absorption standard with 4% HNO3, were purchased from SPC Science (Quebec, Canada). Suprapur nitric acid 65% (v/v) and NH4H2PO4 (Suprapur) were from Merck (Darmstad, Germany).
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7

Quantifying Molybdenum in Purified Proteins

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Molybdenum content in purified protein samples was quantified with an Agilent 7700 Series ICP-MS (Agilent Technologies) using a standard calibration curve of inorganic molybdenum (Fluka). The molybdenum calibration for the inductively coupled plasma mass spectrometry (ICP-MS) was in the range of 0.1–20 µg/l. Samples were mixed with rhodium (Rh(NO3)3) as an internal standard. Gathered data were processed using MassHunter work station software. Protein samples with concentrations of 0.8–1.5 mmol/l were used for analysis. Samples were diluted 1:1 in 69% Suprapur® nitric acid (Merck), after an overnight incubation at room temperature they were diluted with Milli-Q water prior to ICP-MS measurements.
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8

Standardized Selenocompound Preparation

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All chemicals and solvents were of analytical-reagent grade. Ultra pure Milli-Q water (18 MΩ cm) (Millipore, Bedford, MA, USA) was used. Sodium selenite (> 99%), sodium selenate (> 98%), selenomethionine (purity > 99%), selenocystine (purity > 99%), protease XIV, lipase, sodium chloride, pyridine, hydrochloride acid, potassium bromide and sodium borohydride were purchased from Sigma-Aldrich (Aldrich, Milwaukee, WI, USA); selenomethylselenocysteine (> 99.5%) and ethyl chloroformate were obtained from Fluka; and ethanol was pesticide grade (Romil, Waterbeach, Cambrigde, UK). Potassium dihydrogen phosphate, Dipotassium hydrogenphosphate, Suprapur® nitric acid, Suprapur® hydrogen peroxide were purchased from Merck (Merck, Darmstadt, Germany).
Stock solutions of the selenoamino acids, Se(IV) and Se(VI) (approximately 1000 mg Se L -1 ) were prepared in 0.1 M HCl and stored at 4 °C. Working solutions were prepared daily by dilution.
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9

Determination of Serum Magnesium Levels

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The serum samples were defrosted; 200 µL of serum was transferred to digestion vessels (DigiTUBE SCP SCIENCE 50 mL class A) and mixed with 1.5 mL of 65% Suprapur® nitric acid (Merck, Darmstadt, Germany) and 5.0 mL of deionized water. Then, vessels were placed in heating blocks (DigiPREP SCP SCIENCE) and digested for 60 min at 120 °C. After digestion, vessels with solution were left to reach room temperature (RT) and were filled with deionized water to 10 mL. The analysis was performed using PlasmaQuant PQ 9000 Analytik Jena AG. The following operating conditions of ICP-OES were used: power 13,000 W, plasma gas 14.0 L/min, auxiliary gas 0.50 L/min, nebulizer gas 0.60 L/min, and the monitoring direction of the plasma flame was axial. Standard solution for calibration curves of magnesium at the concentration of 1000 µg/L was prepared by diluting magnesium 1000 mg/L standard (PlasmaCAL SCP SCIENCE) with 0.5% nitric acid in deionized water. The analysis line used for magnesium quantification was 279.08 nm. Each serum sample was run in triplicate.
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10

Kynurenine Pathway Metabolite Quantification

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Tryptophan (T0254), dl-kynurenine (61250), l-kynurenine (K8625), 3-hydroxy-dl-kynurenine (H1771), XA (D120804), Zn acetate (379786), Zn chloride (229997), Zn sulfate (96495), Zn iodide (466360), cadmium chloride (239208), sucrose (S0389), methanol (179337), chloroform (C2432), penicillin (P3032), streptomycin (S9137), Schneider’s Insect Medium (S0146), fetal calf serum (F2442), Hepes (H3375), ammonium acetate (A7262), ammonium bicarbonate (09830), boric acid (B0394), dimethyl sulfoxide-d6 (151874), deuterium oxide (151882), and Zincon monosodium salt (96440) were purchased from Sigma-Aldrich. Metal-free, concentrated (65%) Suprapur nitric acid (1004411000) was from Merck. All chemicals used for the preparation of the defined media are listed in ref. 21 (link) along with a regular diet based on yeast and molasses.
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