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29 protocols using «diisopropyl ether»

1

Biocatalyzed Synthesis of Diverse Compounds

2024
3-Methylbut-2-enal (97%), p-anisidine (99%), acetoxy acetyl chloride (97%), tert-butanol (≥99%), methanol (>99.5%), hexane (>99.5%),
ethyl
acetate (>99.5%), diisopropyl ether (≥98.5%), and immobilized
CAL-B (lipase B from Candida antarctica) on the acrylic resin (L4777) were purchased from Sigma-Aldrich
(St. Louis, MO). Ceric ammonium nitrate (99%) was purchased from Fisher
Scientific Company (Fair Lawn, NJ). Coenzyme A (95%) was obtained
from AmBeed (Arlington Hts, IL). Nickel-affinity chromatography resin
(HisPur Ni-NTA Resin) was purchased from Thermo Fisher Scientific
(Waltham, MA). ATP, DTT, isopropyl β-d-1-thiogalactopyranoside
(IPTG), kanamycin, and phenylmethylsulfonyl fluoride (PMSF) were purchased
from Gold Biotechnology (Olivette, MO). Baccatin III (>98%) and
10-O-deacetylBaccatin III (>98%) were purchased
from Natland
International Corporation (Research Triangle Park, NC). Triethylamine
(100%) was obtained from J. T. Baker (Center Valley, PA). C18 silica
gel resin (carbon 23%, 40–63 μm) was purchased from Silicycle,
Quebec City, Quebec, Canada. The following compounds (Table 1) were biocatalyzed in earlier
studies and were among the laboratory inventory.
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2

Derivatization of Sterols Analysis

2023
N,O-Bis(trimethylsilyl)trifluoroacetamide (BSTFA) with 1% TMCS, tert-butyl methyl ether (MTBE), ethyl acetate, methanol, n-hexane, dichloromethane, diisopropyl ether, toluene, anhydrous pyridine, trifluoroacetic acid, sodium methanolate, silica gel (70–230 mesh, high purity), and standards of stigmasterol (95%), 5α-cholestane, and ethyl heptadecanoate were purchased from Sigma-Aldrich (Merck KGaA, Darmstadt, Germany). Glyceryl heptadecanoate was obtained from Larodan (Sweden).
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3

Lipid Depletion from Fetal Bovine Serum

2022
Lipids were removed from fetal bovine serum (Sigma) by stirring with 0.8 vol di-isopropyl ether (Sigma-Aldrich) and 0.2 vol n-butanol (Sigma) for 30 minutes at room temperature, followed by centrifugation at 4,000 × g for 15 minutes at 4°C to achieve phase separation. Serum proteins retained in the lower, aqueous phase were carefully collected, leaving behind lipids in the upper phase and interphase. Solvent contaminants were removed by stirring the serum for 2 hours while allowing a slow stream of nitrogen gas to blow over the surface of the serum. Any remaining solvent contaminants were further removed by dialysis for 72 hours using dialysis cassettes (Thermo Scientific).
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4

Lipid Removal from Fetal Bovine Serum

2022
Lipids were removed from fetal bovine serum (FBS, Sigma) by stirring with 0.8 vol di-isopropyl ether (Sigma-Aldrich) and 0.2 vol n-butanol (Sigma) for 30 min at room temperature, followed by centrifugation at 4000 g for 15 min at 4°C to achieve phase separation. Serum proteins retained in the lower, aqueous phase were carefully collected, leaving behind lipids in the upper phase and interphase. Solvent contaminants were removed by stirring the serum for 2 hours while allowing a slow stream of nitrogen gas to blow over the surface of the serum. Any remaining solvent contaminants were further removed by dialysis for 72 hours using dialysis cassettes (Thermo Scientific).
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5

Synthesis of Stigmasteryl Esters

2021
Stigmasterol, stigmasteryl chloroformate (StigCF), succinic anhydride, 4-(dimethylamino)pyridine (DMAP), N,N′-dicyclohexylcarbodiimide (DCC), 3-palmitoyl-sn-glycerol, acetic acid, ethanol-free chloroform, ethyl acetate, methanol, n-hexane, dichloromethane, diisopropyl ether, toluene, and pyridine were purchased from Sigma-Aldrich (Merck KGaA, Darmstadt, Germany). 1-Oleoyl-sn-glycerol was purchased from Carbosynth Ltd., (Compton, UK) and glyceryl heptadecanoate was acquired from Larodan (Solna, Sweden).
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Top 5 protocols citing «diisopropyl ether»

1

Enzymatic Synthesis of 2-Phenethyl Acetate

Amano P.S. lipases from B. cepacia and T. lanuginosus, 2phenethyl alcohol, vinyl acetate, 2-phenethyl acetate, and diisopropyl ether were purchased from Sigma-Aldrich Chemical Co., St. Louis, MO, USA. Absolute ethanol 99.9% was from Cinética, Brazil. Commercial canola refined oil was purchased in a local supermarket. The reagents used in high performance liquid chromatography (HPLC) were n-hexane, n-propyl alcohol and acetonitrile (J.T. Baker). The standards tri-olein, di-olein, monoolein and methyl-oleate were purchased from Accustandard. Other materials and reagents were of analytical grade.
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2

Automated Peptide Synthesis and Characterization

DMF (dimethylformamide), DCM (dichlormethane), diisopropylether, piperidine and TIPS (triisopropylsilane) were purchased from Sigma-Aldrich. NMM (4-methylmorpholine) and TFA (2,2,2-trifluoroacetic acid) were acquired from Fisher Scientific; Fmoc-protected Wang-resins, Fmoc-protected amino acids, and HCTU (O-(6-chloro-1-hydrocibenzotriazol-1-yl)-1,1,3,3-tetra -methyluronium hexafluorophosphate) were obtained from AAPPTEC. An Overture robotic solid phase peptide synthesizer (Protein Technologies, Tucson, USA) was used to synthesize peptides on a 20 µmol scale utilizing 10-fold excess of Fmoc-protected amino acids (200 mM) relative to the Fmoc-Wang-resin. Deprotection by 20% piperidine in DMF for 2×5 min. Double coupling was performed in a conservative manner of 2×15 min rotations with a ratio of 1∶1∶2 (200 mM amino acid, 200 mM HCTU, 400 mM NMM) in DMF. DMF washing was applied for 5×30 sec after deprotection and double coupling. Automated cleavage was applied for 2 h with 95% vol.+2.5% vol.+2.5% vol. (TFA, H2O, TIPS), after multiple washing steps with DCM (3×30 sec). Using ice-cold diisopropylether, the peptides were precipitated from the final TFA-peptide solution and rewashed. All peptide products were analyzed on an LC-20A HPLC instrument (Shimadzu) using an rpC18, 110 Å, 5 µm, 150×3 mm column (Macherey-Nagel), with a linear gradient of 5–70% ACN/H2O (0.1% TFA) over 25 min with a flow rate of 0.5 ml×min−1; UV-VIS detection at 210 nm. Masses were detected between 300–1500 Da with a Shimadzu LCMS-2020 single-quad mass spectrometer (ESI+). UV210 purity of all products: >98%. Peptide sequences are denoted with the calculated molecular weight (mw, unit: Da), observed retention times (Rt, unit: minutes) and masses (m+); some peptides exhibited water clusters (*): SII (mw = 331.40, Rt = 9.87, m+ = 332.15, 333.15, 663.4, 664.4), IIN (mw = 358.43, Rt = 6.86, m+ = 359.15, 360.15, 719.40, 717.45, 718.45), INF (mw = 392.45, Rt = 10.15, m+ = 393.15, 394.10, 786.30, 785.4, 1175.75), NFE (mw = 408.41, Rt = 7.66, m+ = 408.10, 409.95, 817.35), FEK (mw = 422.48, Rt = 6.45, m+ = 432.20, 424.20), EKL (mw = 388.46, Rt = 7.59, m+ = 389.15, 390.15, 777.45), SIIN (mw = 445.51, Rt = 8.86, m+ = 446.25, 447.25, 891.55, 892.50), IINF (mw = 505.61, Rt = 10.36, m+ = 527.35*, 528.25*, 529.30*, 957.30*, 958.40*), INFE (mw = 521.57, Rt = 9.77, m+ = 522.25, 523.20, 1043.55, 1044.55, 1045.50), NFEK (mw = 536.59, Rt = 6.93, m+ = 537.25, 538.25, 539.25), FEKL (mw = 534.63, Rt = 9.39, m+ = 536.35, 537.25, 538.20, 1071.65, 1072.60), SIINF (mw = 592.68, Rt = 11.99, m+ = 593.30, 594.35, 596.25, 1184.85, 1185.75, 1186.70, 1187.70), IINFE (mw = 634.72, Rt = 10.76, m+ = 635.35, 636.30, 637.30, 1269.70, 1270.80), INFEK (mw = 649.74, Rt = 8.84, m+ = 325.75, 650.35, 651.35, 652.35), NFEKL (mw = 649.74, Rt = 9.59, m+ = 650.35, 651.35, 652.30, 1300.85), SIINFE (mw = 721.79, Rt = 11.5, m+ = 722.40, 723.40, 724.30, 1443.9, 1444.90, 1445.90), IINFEK (mw = 762.89, Rt = 9.77, m+ = 382.35, 763.40, 764.40, 765.40), INFEKL (mw = 762.89, Rt = 10.84, m+ = 382.30, 763.45, 764.4, 957.45, 965.45, 965.45), SIINFEK (mw = 849.97, Rt = 10.51, m+ = 425.80, 850.50, 851.45, 852.45), IINFEKL (mw = 876.05, Rt = 11.51, m+ = 438.95, 876.55, 877.50, 878.50).
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3

Synthesis of Octa Ammonium POSS-HCl

Octa(3-aminopropyl)silsesquioxane hydrochloride (Octa Ammonium POSS-HCl) came from Hybrid Plastics (Hattiesburg, MS). (Boc)2-L-lysine-OH and dioxane were purchased from Fisher Scientific (Pittsburg, PA). Pentafluorophenol (pfp-OH) was obtained from Oakwood Products, Inc. (Columbia, SC). 4-Formylbenzoic acid (FB) and diisopropyl ether were from Sigma-Aldrich (Louis, MO). Anhydrous N,N-diisopropylethylamine (DIPEA), dichloromethane (DCM), and N,N-dimethylformamide (DMF) were purchased from Alfa Aesar (Ward Hill, MA, USA). Trifluoroacetic acid (TFA) was obtained from ACROS Organics (Morris Plains, NJ, USA). All reagents were used without further purification.
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4

Sphingolipid Extraction and Analysis

D-erythro-sphingosine was purchased from Biomol Research, Inc. (Plymouth Meeting, PA, USA). C 17 sphin-gosine and C 17 sphingosine-based ceramide were from Avanti Polar Lipids, Inc. (Alabaster, AL, USA). Pyridine, diisopropylether and heptane were from Sigma (St. Louis, MO, USA). Fetal bovine serum and culture medium for cell culture were obtained from Life Technologies, Inc. (Gaithersburg, MD, USA). HPLC-grade methanol was purchased from Merck KBaA (Darmstadt, Germany). o-Phthalaldehyde (OPA) was obtained from Molecular Probes, Inc. (Eugene, OR, USA). Other reagents were of the highest purity available.
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5

Solvent Procurement for Analytical Experiments

Acetone (HPLC grade), chloroform (HPLC, ≥99.9 %), diethyl ether (≥99.9 %), 2,5 dihydroxybenzoic acid (DHB, ≥98 %), diisopropylether (ACS reagent, ≥99 %), hexane (HPLC grade), and methanol (Optima LC/MS) were purchased from Sigma-Aldrich (St. Louis, MO). Isopentane (2-methylbutane) and acetic acid (Glacial, ACS reagent) were acquired from J.T. Baker (Phillipsburg, NJ).
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