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Cholesterol

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Cholesterol is a lab equipment product that measures the concentration of cholesterol in a given sample. It provides quantitative analysis of total cholesterol, HDL cholesterol, and LDL cholesterol levels.

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2 304 protocols using «cholesterol»

1

Lipid Nanoparticle-Encapsulated mRNA Formulation

2025
ALC‐0315, ALC‐0159, 1,2‐di‐O‐octadecenyl‐3‐trimethylammonium propane (DOTMA), 1,2‐dioleoyl‐sn‐glycero‐3‐phosphoethanolamine (DOPE), 1,2‐distearoyl‐sn‐glycero‐3‐phosphorylcholine (DSPC), 1,2‐distearoyl‐sn‐glycero‐3‐phosphoethanolamine‐polyethylene glycol 2000 (DSPE‐PEG) and triolein were purchased from MedChemExpress (Monmouth Junction, NJ, USA). Cholesterol, GelRed nucleic acid staining dye, porcine stomach type III mucin, and Triton X‐100 were obtained from Sigma‐Aldrich (St. Loius, MN, USA). β‐Sitosterol was a product of Abcam (Cambridge, UK). 6‐(p‐Toluidino)−2‐naphthalenesulfonic acid sodium salt (TNS) was purchased from Santa Cruz Biotechnology (Dallas, TA, USA). ONE‐Glo Luciferase Assay reagent, VivoGlo luciferin, and nuclease‐free water were obtained from Promega Corporation (Madison, WI, USA). 5‐Methoxyuridine‐modified firefly luciferase mRNA (FLuc mRNA) and SARS‐CoV‐2 Delta variant (B.1.617.2) spike protein‐encoding mRNA (PVX1010 mRNA)[32 (link)
] were produced using a proprietary custom process at TriLink BioTechnologies (San Diego, CA, USA). Cy5‐tagged FLuc mRNA (Cy5‐mRNA) was bought from ApexBio Technology (Houston, TX, USA). AlamarBlue cell viability assay reagent, ACK lysing buffer, DiI (1,1′‐dioctadecyl‐3,3,3′,3′‐tetramethylindocarbocyanine perchlorate), Hoechst 33 342, Lab‐Tek II chambered coverglass, LysoTracker Green DND‐26, Pierce detergent‐compatible Bradford assay kit and Quant‐iT RiboGreen RNA assay kit were bought from Thermo Fisher Scientific (Waltham, MA, USA). SARS‐CoV‐2 spike protein ELISA kit (GeneTex, USA), OptEIA mouse TNF ELISA kit (BD Biosciences, USA), and mouse interferon‐γ (IFN‐γ) single‐color ELISPOT kit (Cellular Technology Ltd, USA) were used as per manufacturer instructions. All other chemicals and reagents were of analytical grade.
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2

Methotrexate Delivery Optimization via Phospholipids

2025
Methotrexate was purchased from Tokyo Chemical Industry Co., Ltd., Tokyo, Japan. Phospholipids (Lipoid S100) were donated by Lipoid GmbH, Ludwigshafen, Germany. Glycocholic acid, taurocholic acid, chlorpromazine hydrochloride, genistein, filipin, amiloride hydrochloride, cholesterol, 4′,6-Diamidino-2-phenylindole dihydrochloride, 2-(4-Amidinophenyl)-6-indolecarbamidine dihydrochloride (DAPI dihydrochloride), and endothelial cell growth supplement (ECGS) from bovine neural tissue were purchased from Sigma Aldrich, St. Louis, MO, USA. Alexa Fluor™ 488 phalloidin and Lissamine™ rhodamine B 1,2-dihexadecanoyl-sn-glycero-3-phosphoethanolamine trimethylammonium salt (rhodamine DHPE) were purchased from Invitrogen, Carlsbad, CA, USA. All other reagents were of analytical grade and were commercially available.
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3

Cell Senescence and Mitochondrial Assays

2025
NaCl, KCl, CaCl2, MgCl2, HEPES, NaOH, sucrose, NH4HCO3, Na2HPO4, KH2PO4, K2HPO4, MgSO4, cholesterol, hypotaurine, and O-phosphoethanolamine were purchased from Sigma-Aldrich. Phosphate buffer saline was purchased from Sangon Biotech. Dulbecco’s Modified Eagle’s medium (DMEM) was purchased from HyClone. Fetal bovine serum and trypsin-EDTA (0.25%) were purchased from Gibco. Trypan blue, penicillin and streptomycin were purchased from Biosharp. Hydrogen peroxide was purchased from Sinopharm. Phosphocreatine was purchased from Aladdin. The Senescence-Associated β-Galactosidase kit and Mitochondrial membrane potential assay kit were purchased from Beyotime. A cellular ROS assay kit and dihydroethidium (DHE) were purchased from Abcam. Live-cell GSH probe (mClB) was purchased from MedChemExpress.
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4

Artificial Membrane Permeation of Buccal Drugs

2025
Classical artificial membranes used for skin permeation studies are not suitable to study dextrose’s buccal absorption since they do not reflect the mucosal barrier. However, the efficacy of an in vitro procedure to predict drug buccal absorption using an artificial membrane impregnated with lipids has previously been described. Dextrose permeation was determined according to this previously reported procedure with minor modifications [22 (link)]. Briefly, a lipid mixture constituted of 4.7 g of 1-octanol (Sigma-Aldrich Chemie GmbH, Taufkirchen, Germany), 0.15 g of phosphatidylcholine (Sigma-Aldrich Chemie GmbH, Taufkirchen, Germany) and 0.15 g of cholesterol (Sigma-Aldrich Chemie GmbH, Taufkirchen, Germany) was prepared in a beaker (octanol/phosphatidylcholine/cholesterol ratio 94%/3%/3% w/w/w). The mixture was placed under magnetic stirring for 1 h. The cellulose acetate–nitrate mixture membrane (0.025 µm MCE membrane®, Sigma-Aldrich Chemie GmbH, Taufkirchen, Germany) was weighed and impregnated by submersion for 1 h in the lipid mixture. Impregnated membranes were then interposed between two absorbing papers to eliminate the excess lipids, and were weighed again to determine the percentage of lipid impregnation. The membranes were used on the day of the experiment to avoid membrane drying or lipid degradation.
The permeation of 40% (w/v) dextrose gel was studied with this artificial membrane. Although this artificial membrane’s efficacy had already been proven and compared with porcine buccal mucosa with naproxen [22 (link)], and since paracetamol and caffeine can be administered through buccal mucosa, positive permeation controls were performed with compounded 14% (w/v) paracetamol gel and 20% (w/v) caffeine gel using the same gel formula used for dextrose gel compounding.
An in vitro permeation study was conducted using a Phoenix RDS Automated Diffusion platform (model DB-6 Manuel, Teledyne Hanson Research, Chatsworth, USA) equipped with twelve in-line vertical diffusion cells enabling simultaneous in vitro release experiments. Each 15 mL cell receptor compartment, Franz cell, was filled with simulated plasma consisting of a phosphate-buffer solution (0.8 g/L Na2HPO4, 0.15 g/L KH2PO4 and 9 g/L NaCl) at pH 7.4 for the experiments with dextrose and caffeine gels and at pH 5.8 for the paracetamol to ensure good enough solubility to maintain sink condition. The simulated plasma was maintained at 32 ± 1 °C by the dry heat block and continuously stirred at 200 rpm. For all 3 gels, approximately 1.15 g (1 mL) was uniformly spread on the dosage chamber with an extemporaneously impregnated membrane placed between the dosage chamber and the simulated plasma. The cell was sealed by placing a cover on top of the dosage chamber. At given time intervals (0.5, 1, 1.5, 2, 2.5, 3, 3.5, 4, 6, 8 and 10 h), aliquots (0.5 mL) of simulated plasma were withdrawn from the cell receptor compartment through the sampling port and replaced by an equal volume of fresh pre-warmed simulated plasma, to keep the volume constant and sink conditions constant. The experiments were reproduced 8 times for the 3 different gels and the dilution effect was considered to determine the cumulative amounts of dextrose, caffeine and paracetamol. Their concentrations in each sample of withdrawn simulated plasma were determined.
The glucose contents were determined as previously described in this work. The direct determination of paracetamol content was performed at 243 nm using a UV–visible spectrophotometer (UV 2401PC, Shimadzu Scient. Inst., Colombia, SC, USA) according to a previously published method [42 ]. The caffeine contents were measured using the HPLC-UV method validated to be stability-indicating in our laboratory. Briefly, 10 µL of sample was injected into an automatic HPLC-UV-DAD apparatus (Dionex Ultimate 3000, Dionex Softron GmbH, Germering, Germany) with an RP18 column (1000 Å, 5 μm, 4 × 250 mm) (Lichrospher®, Sigma-Aldrich Chemie GmbH, Taufkirchen, Germany). Data analysis was performed using Chromeleon® software (Version 7.2.8, Thermo Fisher Scientific, Waltham, USA). The mobile phase consisted of a mixture of ammonium acetate buffer adjusted to pH 4 (88%, v/v) and acetonitrile (12%, v/v), and the wavelength for caffeine detection was 274 nm. The permeated profiles of the gels were plotted as the cumulative amount of dextrose, paracetamol and caffeine diffused per unit area of membrane versus time. The flux (μg/cm2/h) and lag time (h) estimates were generated using the free Skin and Membrane Permeation Data Analysis (SAMPA) software (version 1.04) developed by Bezrouk et al. for skin and membrane permeation data analysis [43 (link)].
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5

Lipid Nanoparticle Formulation and Characterization

2025
The preparation procedure and formulation parameters remained unchanged for all LNPs, while the nucleic acid cargo varied for the different studies. 16 LNPs with different barcoded ssDNA (IDT, Table S3, Supporting Information) were formulated for the biodistribution study, and LNPs with Cre mRNA (Etherna) were formulated for the functional delivery study. Lipid components were: DLin‐MC3‐DMA (chemically synthesized in house), cholesterol (C8667, Sigma‐Aldrich), DSPC (LP‐R4‐076, Corden Pharma) and DMPE‐PEG2000 (PM‐020CN, NOF Corporation). Prior to particle assembly, the nucleic acid was solubilized in 50 mM citrate buffer pH 3 (Q2445, Teknova), and the lipids were dissolved in ethanol and mixed with a molar ratio of 50:38.5:10:1.5 (MC3:cholesterol:DSPC:DMPE‐PEG2000). LNPs were prepared with a NanoAssemblr Ignite (Precision NanoSystems Inc.) by mixing the two solutions at a flow rate of 12 ml min−1 with a 3:1 volume ratio (nucleic acid:lipid solution) to form LNPs with a lipid/nucleic acid weight ratio of 10:1. Particles were loaded into a Slide‐A‐Lyzer G2 dialysis cassette (Thermo Scientific), dialyzed in PBS pH 7.4 overnight, and then sterile filtered using a 0.2 µm filter.
The encapsulation efficiency and nucleic acid concentration were determined with either the RiboGreen (mRNA) or OliGreen (ssDNA) Assay (Thermo Fisher Scientific), according to the manufacturer's guidelines. Particle size was determined with dynamic light scattering using a DynaPro Plate Reader III (Wyatt Technology Corporation) for ssDNA LNPs, and Zetasizer Nano ZSP (Malvern Panalytical Ltd) for mRNA LNPs. Encapsulation efficiency for all LNPs was above 90% and particle size varied from 60 to 90 nm.
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Top 5 most cited protocols using «cholesterol»

1

Structural Determination of Human β₂-Adrenergic Receptor

Human β2AR fused to an amino-terminal T4 lysozyme23 (link) was expressed and purified as described above. Following purification by alprenolol sepharose, the receptor was washed extensively with 30 μM of the low affinity antagonist atenolol while bound to FLAG affinity resin to fully displace alprenolol, then washed and eluted in buffer devoid of ligand to produce a homogeneously unliganded preparation. The receptor was then incubated for 30 minutes at room temperature with a stoichiometric excess of ligand (HBI or BI167107). A 1.3-fold molar excess of Nb6B9 was then added, and the sample was dialyzed overnight into a buffer consisting of 100 mM sodium chloride, 20 mM HEPES pH 7.5, 0.01% lauryl maltose neopentyl glycol detergent, and 0.001% cholesteryl hemisuccinate. In each case, ligand was included in the dialysis buffer at 100 nM concentration or higher. The sample was then concentrated using a 50 kDa spin concentrator and purified over a Sephadex S200 size exclusion column in the same buffer as for dialysis, and the β2AR-Nb6B9-ligand ternary complex was isolated. In the case of adrenaline, the low affinity and chemical instability of the ligand precluded overnight dialysis, so 100 μM adrenaline was added to receptor for 30 minutes at room temperature, then a 1.3-fold molar excess of Nb6B9 added and the sample was incubated for 30 minutes at room temperature. Following incubation, the sample was concentrated and immediately purified by size exclusion as above.
Following purification, samples were concentrated to A280 = 55 using a 50 kDa concentrator to minimize the detergent concentration in the final sample, then aliquoted into thin-walled PCR tubes at 8 μL per aliquot. Aliquots were flash frozen in liquid nitrogen and stored at -80 °C for crystallization trials. For crystallization, samples were thawed and reconstituted into lipidic cubic phase with a 1:1 mass:mass ratio of lipid. The lipid stock consisted of a 10:1 mix by mass of 7.7 monoacylglycerol (generously provided by Martin Caffrey) with cholesterol (Sigma). Samples were reconstituted by the two syringe mixing method10 (link) and then dispensed into glass sandwich plates using a GryphonLCP robot (Art Robbins Instruments). In the case of the β2AR-adrenaline complex, 1 mM fresh adrenaline was mixed with receptor prior to reconstitution. Crystals were grown using 30 nL protein/lipid drops with 600 nL overlay solution, which consisted of 18 – 24 % PEG400, 100 mM MES pH 6.2 to pH 6.7, and 40 – 100 mM ammonium phosphate dibasic. Crystals grew in 1 – 3 days, and were harvested and frozen in liquid nitrogen for data collection.
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Corresponding organizations : Stanford University

2

Erythroid Differentiation of Progenitor Cells

The immortalized erythroid progenitor cell lines were induced to differentiate into more mature erythroid cells by culture in erythroid differentiation medium; IMDM (Sigma) containing 10% human AB serum (Kohjin Bio, Saitama, Japan or TAKARA BIO), α-tocopherol (20 ng/ml; Sigma), linoleic acid (4 ng/ml; Sigma), cholesterol (200 ng/ml; Sigma), sodium selenite (2 ng/ml; Sigma), holo-transferrin (200 µg/ml; Sigma), human insulin (10 µg/ml; Sigma), ethanolamine (10 µM; Sigma), 2-ME (0.1 mM; Sigma), D-mannitol (14.57 mg/ml; Sigma), mifepristone (an antagonist of glucocorticoid receptor, 1 µM; Sigma) and EPO (5 IU/ml).
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Corresponding organizations : RIKEN BioResource Research Center, Kyushu University

3

Lipidoid Nanoparticles for siRNA Delivery

Lipidoids were formulated into nanoparticles for all applications. Nanoparticles
were formed by mixing lipidoids, cholesterol (Sigma Aldrich), DSPC (Avanti Polar Lipids,
Alabaster, AL) and mPEG2000-DMG (MW 2660, gift from Alnylam Pharmaceuticals, Cambridge,
MA) at a molar ratio of 50: 38.5: (11.5 – X): X in a solution of 90%
ethanol and 10% 10 mM sodium citrate (by volume). An siRNA solution was prepared
by diluting siRNA in 10 mM sodium citrate such that the final weight ratio of lipidoid:
siRNA was between 5:1 and 10: 1, depending on the experiment. Equal volumes of lipid
solution and siRNA solution were rapidly mixed together using either a microfluidic
device43 (link) or by pipet to form
nanoparticles. Particles were diluted in phosphate buffered saline (PBS, Invitrogen) and
then dialyzed against PBS for 90 minutes in 3500 MWCO cassettes (Pierce/Thermo Scientific,
Rockford, IL).
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Corresponding organizations : Massachusetts Institute of Technology

4

Lipidoid Nanoparticles for siRNA Delivery

Lipidoids were formulated into nanoparticles for all applications. Nanoparticles
were formed by mixing lipidoids, cholesterol (Sigma Aldrich), DSPC (Avanti Polar Lipids,
Alabaster, AL) and mPEG2000-DMG (MW 2660, gift from Alnylam Pharmaceuticals, Cambridge,
MA) at a molar ratio of 50: 38.5: (11.5 – X): X in a solution of 90%
ethanol and 10% 10 mM sodium citrate (by volume). An siRNA solution was prepared
by diluting siRNA in 10 mM sodium citrate such that the final weight ratio of lipidoid:
siRNA was between 5:1 and 10: 1, depending on the experiment. Equal volumes of lipid
solution and siRNA solution were rapidly mixed together using either a microfluidic
device43 (link) or by pipet to form
nanoparticles. Particles were diluted in phosphate buffered saline (PBS, Invitrogen) and
then dialyzed against PBS for 90 minutes in 3500 MWCO cassettes (Pierce/Thermo Scientific,
Rockford, IL).
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Corresponding organizations : Massachusetts Institute of Technology

5

Nanoscale LNP Synthesis and Characterization

To synthesize LNPs, an aqueous phase containing mRNA and an ethanol phase containing lipid and cholesterol components were mixed using a microfluidic device as previously described.91 (link) Briefly, the aqueous phase was prepared using 10 mM citrate buffer and either luciferase mRNA with N1-Methyl-PseudoU and 5-Methyl-C substitutions (Trilink Biotechnologies, San Diego, CA) or CAR mRNA (synthesized as described above) at 1 mg/mL. To prepare the ethanol phase, ionizable lipid, 1,2-distearoyl-sn-glycero-3-phosphoe-thanolamine (DOPE) (Avanti Polar Lipids, Alabaster, AL), cholesterol (Sigma, St. Louis, MO), and lipid-anchored polyethylene glycol (PEG) (Avanti Polar Lipids) components were combined at a molar ratio of 35%, 16%, 46.5%, and 2.5%, respectively. Pump33DS syringe pumps (Harvard Apparatus, Holliston, MA) were used to mix the ethanol and aqueous phases at a 3:1 ratio in a microfluidic device.91 (link) After mixing, LNPs were dialyzed against 1× PBS for 2 h before sterilization via 0.22 μm filters. Dynamic light scattering (DLS) performed on a Zetasizer Nano (Malvern Instruments, Malvern, U.K.) was then used to measure, in triplicate, the diameter (z-average) and polydispersity index (PDI) of the LNPs suspended in 1× PBS. A NanoDrop ND-1000 Spectrophotometer (ThermoFisher, Waltham, MA) was used to obtain the mRNA concentration of each LNP formulation.
Further analysis of top-performing LNP formulations included Quant-iT RiboGreen (ThermoFisher) and 6-(p-toluidinyl)naphthalene-2-sulfonic acid (TNS) assays to determine the encapsulation efficiency and pKa of the LNPs, respectively. The Quant-iT Ribogreen was performed as previously described.92 Briefly, equal concentrations of LNPs were treated with Triton X-100 (Sigma) to lyse the LNPs or left untreated, and after 10 min, the groups were plated in triplicate in 96-well plates alongside RNA standards. The fluorescent Ribogreen reagent was added per manufacturer instructions, and the resulting fluorescence was measured on a plate reader. A standard curve was used to quantify RNA content and calculate encapsulation efficiency. To determine either LNP or ionizable lipid pKa, a TNS assay was used to measure surface ionization as previously described.72 Buffered solutions of 150 mM sodium chloride, 20 mM sodium phosphate, 25 mM ammonium citrate, and 20 mM ammonium acetate were adjusted to reach pH values ranging from 2 to 12 in increments of 0.5. LNPs or ionizable lipids were added to each pH-adjusted solution in triplicate wells in a 96-well plate. TNS was then added to each well to reach a final TNS concentration of 6 μM, and the resulting fluorescence was read on a plate reader. The pKa was then calculated as the pH, at which the fluorescence intensity was 50% of its maximum value, reflective of 50% protonation.
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Corresponding organizations : University of Pennsylvania, Washington University in St. Louis, California Institute for Regenerative Medicine

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